Browse of TCMCG051C00058 protein

CDS

Accession Number	TCMCG051C00058
gbkey	CDS
Protein Id	XP_006368536.2
Location	complement(join(259374..259978,260562..260933,261366..262431,262916..263211,263678..263756,263898..263985,264504..264636,264725..264989,265108..266466,266892..267143,268694..268934,270082..270141,270322..270651,270753..270831,271764..271843,271942..272019,272295..272375,272452..272539,272762..272848,273003..273142,273269..273342,274736..274759))
Gene	LOC18094284
GeneID	18094284
Organism	Populus trichocarpa

Protein

Length	1958aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA17973
db_source	XM_006368474.2
Definition	mediator of RNA polymerase II transcription subunit 13 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACTAATGTATTCAAAATTGGTGGTCTTCATCATATATCATGGTTCCAGTTTCTCCCAAATGAATCTGATTTGAACTCTTTACCTGATAAGAGTGTGAAGGTAGAGCAGAAAGATGTGGCTACATGTCTCGTGATTTTGGCTCATTTGCAGTTGCAGAAAGAGGGATTTCTAAGCACTTGGACCAATTCCTTTGTTGGACCTTGGGATCCATCACAAGGTCTACATAATCCTGATGAGAAAATAAAGCTCTGGCTTTTTCTTCCTGGACGTTATTCATCTGTTGTTGAGAAGGCTCAAGCTGCAGTGTCTAGATTAAGAGTTGTTGCATCTGGAATTTGGGTTGCTCCTGGGGACTCTGAAGAGGTTGCAGCAGCCCTTTCTCAATCTTTGAGGAATTACATAGAGAGAGCATTGGCCAGGCATTCATACATGCGGTTTGGAGATGTGTTTTTAAAGTACCATCCATCTCAAAGTGAAGGACTTTCCAGTAAAGGACAGCCCACAGTCGAGTTCATCTTTTCTGCCTCTGAAGAGACGATCTTTGTGCACGTGATAATATCTGCAAAGCATATCCGAGCACTTTCAAATGGTGATGTGGAAAGAGTGTTAAAACATTCTTCTACAAATTCCAGTTTTAGGCTTCCAGTGATTGCTTCTCCTCATGGAATTCGTGGTTCGCTGACAGGATGTTGTCCAAGTGATCTTGTCAAGCAAGTGTATTTGAGTTCTGGCAAGTTTAGGACATTAAATGGATATATTGGCCTGCCATATCATGTTTCTCAAGGACCTGGCTGTCAGCTGAGGGGGCAAAATTGCTATGTTGAAATTACACTAGGTTGCCCAAGGTCTGATAGTGACAAGGCATTGCAAACAAACTCACAGTCAACTAAGAATTCATCCAAGAATTATATTGTAGAATCTATTGCAGCAAGGAGAGGTGATCAGAAGGTATCGCCAGATCACTTATCAGCTCATGAGAAAGCATTTATTTATCCTGCTGAAGCAGTTGTTGTTCCAGTCTTACAAAAATCTTTTGCTAGGTCTTCTTTGAAAAGATTTTGGCTGCAAAACTGGATAGGGCCATCACTACCTGGTTCATCATTCTTTATGCATTGTGGTGGTGATACAGATTTTCTGGAAGGATCTTGGATTGAATCTAATGGAGTACGTATGCAGCACGGATATAACAGCAGTAGCAATAGTAATAGTAGCAGCATCAGCTCCATAAGCAGCGGCTCTAGTGACAGTGATTACAAGATGACCACTGGTGAGCTTGAGGCTGATGCTGATTCATTGTCATGCAGACAATCTGGTTTATCTTCCAATGATCAGATGGAAAATGATGGCCTCAAATTGGGTTCTAAGCGTCCTAGAACAGGGATGACTGAGCCATTTGGTCAAGCGGGCATGGTTAAAAATGTTCACATGCAAGATTTTGGTTCAGTAGAAGTTAATGATTCAGCTATCACAGGAATTGCAAATGATCAGATTGGATCTCGTTGGGATTGGGACGATGACAGAGGTGCGGGCATGGATATCCAAGCTCTTCTCTCTGAATTTGGTGATTTTGGGGACTTCTTTGAGAATGATGATCTGCCTTTTGGAGAGCCTCCTGGAACAGCAGAGTCGCAGGCTCTTATGTTTTCTGGTCCTGATTGTGGTGAAGTTGCTAACAGTCCTATTGGGGTAATGGATGTTGTGGATCAGATGCTTCCGCCAGTAGCTTTTCCATCTTTTGAAAGTTTTAATCCGTCTCCTGCAGTAGTCATAGATGAAAGTGCCAGCAAAAGCCAAGAAGACACACATGGTACTCTGGCATTAATTCCAGTGAACTGCACTCCATCATCTTCTTCAGGCGAGTTTGATCATTTAATCAAAGCCGAAGCTTTGATGACCTTTGCCCCAGAATATGGGGCAGTTGAAACCCCTACAAGTGAATTCTCCTCATCGATTTTCAGGAGTCCATATTGTCCAAAATCTCGCCAAGTGGAGAGCTCAAATTCGAGTTCAAATAATTATGCATATGGTGCAACACCACCATCTTCTCCTTGCTTTGAAGGATCAAATGAGAAAACTGGCATACAGGTGAATCTGAAAACAGGTCCTGGAAGGAATGACACAAAGAAATATTACACTCTTGTGGAAGGTGGGAAAGTACCACTTGATAGAAGAACATTAACATCTAATGAAAGCCGTCCTACAAGTGAGGCGATGATGCCATCTCCATTATTGAATTCTAATTCATCAAATACTGTCAAATCTGCCCAGAGGAAAATGAGTGATGGCACACTAGGAGCAGAAAGTTTCTTAGTTTCTGTGAAGACTGTTCTGGCAACTGAAGTAGAATGCATTATGTTTCAAGCTTCCATGTGTAGAATGCGACACACACTGTTGTCTCCTGGTAACCCTACATCTGTAAATTTGCATAGGTTAAGTGGAAGCACTGGTTTGAATCAGGTGCATGGTGATGCAAGTACCATGACAGACAACATATCTGGCAGGCATGAAGTGAAGAAAAAAGAATCTATACCAGTTAGAATAGCTGGGGATATGGATGGTGGAGTACTAGATGGGCATCTTAGTTCACCTGTAGGTGTTTGGCGCTCTGTTGGAGTTCCTAAATTAACAAAACATACTAGTTCATCGAATATTGAAGTTAGTGTGTCCTTGCCACACCATTCATTCAGCGAGGAAGGAGTTCTCTCATATAGGCAAAGGCAGCAGCCACTGCAGGAGCTTTTGGATGGCATGGCATTGCTTGTCCAACAAGCTACTTCCTTTGTTGATGTGGCTCTGGATGCTGATTGTGGTGATGGTCCTTATGGTTGGCTTGCATTACAAGAACATTGGAGGCGTGGATTTTCTTGCGGGCCTTCCATGATCCATGCAGGTTGTGGAGGGACTTTGGCTTCTTGTCATTTTCTGGACATTGCTGGCGTGGAACTAGTAGACCCACTTTCTGCTGATATTCATTCTTCTGCAGTGACCACCTTGCTGCAGTCTGAAATCAAAATAGCCTTAAAATCTGCTTTTGGGAATTTGGAAGGTCCTTTATGTGTCACTGATTGGTGCAAAGGCCACATTCAGTCAGGTGATGGAGCAACCACATGCGATGGATCCTCTGGGGAGTCCACTTTAAGTGAATGCAAAGATTCAAGTACTGTAACACTGTCTGTTGGAGAACCAATGAGCCCAGCCCTCTCTTCAGCTGCTGGATCATCTTCCCTCAAAGCATCCAGTACACCAGATGGAGCTAAAGTGGATGAGACATCCCAAAGGAAATCAAATCAAGAAATAGAGCCAGAGCTACTTCCCAGGATAAAGCCAACAGTTTTTGTTCTTCCTTTGCCTGCAATTCTTGTTGGGTACCAGGATGATTGGCTTAAGACATCGGCAAGCTCTTTACAACTCTGGGAAAAGGCTCCTTTTGAACCATATGCTTCACCAAAACCAATAACTTATTGTGTTGTATGTCCAGACATTGATCCCCTTACTTCTGCAGCTGCAGATTTTTTCCAACAACTTGGAACTGTCTATGAAACGTGCAAACTGGGAACTCATTCACCTCAGAGTTTGGGAAACCAAATGGAGATGGATGCAGGGAAATCTTTGTCTTCTGGTTTTGTACTACTTGATTGCCCTCAGTCAATGAAGATAGAAAGCAGTAATGCTTCCCTTGTGGGATCGATAAGCGATTATTTTCTCTCGCTCTCCAATGGTTGGGACCTGGCAAGCTATCTTAAGTCTCTTTCGAAGGCTGTCAAGGCTTTGAAAATTGGTCCATCCTTATCAACAAACCCAAAAGAAGGCAATAGCAGCCCTTGTATGGTTATCTATGTAGTGTGCCCCTTTCCTGAACCTGCTGCAGTTCTACAAACTGTCATTGAATCCTCTGTTTCTATTGGGTCAATCATTCCCCCAGCAAATAGAGAGAGGAGGTCTATGTTGCTGGCTCAGGTCGGCAAAGCATTAAGCAGCTTGGCAGCTGTGGATGAAGCGTCAGCATCAAATGTTCTAGTACTTTCTGGGTTTAGCATTCCTAAATTGGTATTGCAAATTGTGACAGTTGATGCCATTTTTAGGGTCACTAGTCCAGCTCTTAATGAGCTCATCATTCTTAAGGAGACTGCTTTCACTGTATACAATAAGGCCCGGCGAATTTCAAAAGGCTCTTCAAATGATGTTCAGCCATCAACATCAAGTAGATCTCATTTAACACAAATGAGTTCTGTTCCAGCAATGTGGAATTCGTTACCAAGAGAGACTGACATTGATTCTAGATTGAGATCTGGCACTTGGGATAACTCCTGGCAAACAGCAAGGGCTGGAGGCTTGACCTGTGATCCAAACCGAAATGGAGATTTTTCTCTTCAAGATGAGATCCGCTACATGTTTGAACCACTTTTTATTCTTTCAGAGCCCGGATCTCTGGACCATGCAGTTGCACCTACAATTATTGGTAATATGGTCTCTGAATCTTCAAAACTGCAATCTGATGATACTGGTGGAAGCTTCATGCAAAGTGCAAGCTCAGCAGGGAGTGTGGATTCTGGATCTAGCTCACAACATGATGGATCTGAGCCCGATGGCTATGGATCTAGTTATCAAAAGACTCTTCCAAGCCTGCATTGCTGCTATGGATGGACAGAGGACTGGCGTTGGCTTGTTTGCATCTGGACAGATGCAAGAGGAGAATTGCTTGACAGCCATATATTCCCTTTTGGTGGAATTAGTAGTCGCCAGGATACAAAAGGTTTGCAATGCCTTTTTGTACAAGTTTTGCAGCAAGGATGTCAGATACTTCAGGCTTGCTCCTCTCCTGACACTGGTGGTGTAAAGCCTAGAGATTTTGTGATTACTCGAATTGGAAACTTCTTTGAGCTTGAGTACATAGAGTGGCAGAAAGCCATTTATTCAGTAGGGGGTTCTGAGGTGAAGAAATGGCCACTGCAACTACGGCGATCAATGCCTGATGGGATGGCTGCAGGCGCTAATGGTGCTTCCTTGCAGCAACAGGAGATGGGTTTAATTCAAGAAAGAACCTTGCCTTCCTCACCTAGTCCGTTGTATAGCCCTCACTCAAAAGCATCTGGCTATATGAAGGGTGGTTTGGGGCAAACTTCTTCAAGAAAACAGCTTATCGGTGGGCACGCAGCAGTTGACAACTCAAGGGGGATGCTTCAGTGGATGCTGAGCATCAGTTTTGTTACAATTTCAATTGACCATTCTTTACATCTGTTGCTTCAGGCTGATACACCATCTCCTGGAGGAAGTGGCAGTGGTGTTGGCACGTCAATCTATCTGGAAGGTATCACTCCTGTAAAGTCTCTCGGTTCAACATCAGCATCTTACATTTTAATTCCATCACCCAGCATGCGCTTCCTTCCGTCAACACCCCTGCAGCACCCCACATGCCTCACTGCTGAATCCCCACCACTTGCACATCTCCTTCATAGTAAGGGATCTGCAATTCCGCTCTCCACTGGTTTCGTGGTTTCAAAGGCTGTACCTTCCGTGAGGAGAGATTATAAGAGCAATTCAAGAGAAGAATGGCCTTCTGTTCTTTCTGTGAGTCTCATTGATTATTATGGAGGCAATAATATGACCCAAGATAAAATGTTTCGAAGGATTATGAAGCAGGGGGGACGGACTTTAGGTGTAGATGGTAAAGATTTTGAAATCAGGACCCAGGTAATTCTTGAGAGTGTCGCAGCAGAACTTCAAGCCCTATCATGGATGACTGTGAGCCCAGCATATTTGGAGCGACGAACCGCACTTCCATTTCATTGTGACATGGTTTTAAGACTCAGAAGACTGCTTCATTTTGCTGATAAAGAGCTCTCTTCACAGCCTGGTCGGTCACAGGTATAA

Protein:   MWTNVFKIGGLHHISWFQFLPNESDLNSLPDKSVKVEQKDVATCLVILAHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRYSSVVEKAQAAVSRLRVVASGIWVAPGDSEEVAAALSQSLRNYIERALARHSYMRFGDVFLKYHPSQSEGLSSKGQPTVEFIFSASEETIFVHVIISAKHIRALSNGDVERVLKHSSTNSSFRLPVIASPHGIRGSLTGCCPSDLVKQVYLSSGKFRTLNGYIGLPYHVSQGPGCQLRGQNCYVEITLGCPRSDSDKALQTNSQSTKNSSKNYIVESIAARRGDQKVSPDHLSAHEKAFIYPAEAVVVPVLQKSFARSSLKRFWLQNWIGPSLPGSSFFMHCGGDTDFLEGSWIESNGVRMQHGYNSSSNSNSSSISSISSGSSDSDYKMTTGELEADADSLSCRQSGLSSNDQMENDGLKLGSKRPRTGMTEPFGQAGMVKNVHMQDFGSVEVNDSAITGIANDQIGSRWDWDDDRGAGMDIQALLSEFGDFGDFFENDDLPFGEPPGTAESQALMFSGPDCGEVANSPIGVMDVVDQMLPPVAFPSFESFNPSPAVVIDESASKSQEDTHGTLALIPVNCTPSSSSGEFDHLIKAEALMTFAPEYGAVETPTSEFSSSIFRSPYCPKSRQVESSNSSSNNYAYGATPPSSPCFEGSNEKTGIQVNLKTGPGRNDTKKYYTLVEGGKVPLDRRTLTSNESRPTSEAMMPSPLLNSNSSNTVKSAQRKMSDGTLGAESFLVSVKTVLATEVECIMFQASMCRMRHTLLSPGNPTSVNLHRLSGSTGLNQVHGDASTMTDNISGRHEVKKKESIPVRIAGDMDGGVLDGHLSSPVGVWRSVGVPKLTKHTSSSNIEVSVSLPHHSFSEEGVLSYRQRQQPLQELLDGMALLVQQATSFVDVALDADCGDGPYGWLALQEHWRRGFSCGPSMIHAGCGGTLASCHFLDIAGVELVDPLSADIHSSAVTTLLQSEIKIALKSAFGNLEGPLCVTDWCKGHIQSGDGATTCDGSSGESTLSECKDSSTVTLSVGEPMSPALSSAAGSSSLKASSTPDGAKVDETSQRKSNQEIEPELLPRIKPTVFVLPLPAILVGYQDDWLKTSASSLQLWEKAPFEPYASPKPITYCVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQSLGNQMEMDAGKSLSSGFVLLDCPQSMKIESSNASLVGSISDYFLSLSNGWDLASYLKSLSKAVKALKIGPSLSTNPKEGNSSPCMVIYVVCPFPEPAAVLQTVIESSVSIGSIIPPANRERRSMLLAQVGKALSSLAAVDEASASNVLVLSGFSIPKLVLQIVTVDAIFRVTSPALNELIILKETAFTVYNKARRISKGSSNDVQPSTSSRSHLTQMSSVPAMWNSLPRETDIDSRLRSGTWDNSWQTARAGGLTCDPNRNGDFSLQDEIRYMFEPLFILSEPGSLDHAVAPTIIGNMVSESSKLQSDDTGGSFMQSASSAGSVDSGSSSQHDGSEPDGYGSSYQKTLPSLHCCYGWTEDWRWLVCIWTDARGELLDSHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACSSPDTGGVKPRDFVITRIGNFFELEYIEWQKAIYSVGGSEVKKWPLQLRRSMPDGMAAGANGASLQQQEMGLIQERTLPSSPSPLYSPHSKASGYMKGGLGQTSSRKQLIGGHAAVDNSRGMLQWMLSISFVTISIDHSLHLLLQADTPSPGGSGSGVGTSIYLEGITPVKSLGSTSASYILIPSPSMRFLPSTPLQHPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRRDYKSNSREEWPSVLSVSLIDYYGGNNMTQDKMFRRIMKQGGRTLGVDGKDFEIRTQVILESVAAELQALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKELSSQPGRSQV